RetrogeneDB ID: | retro_meug_1959 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold74526:1975..2683(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMEUG00000001969 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 91.53 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | TANGREDEEKIIGGYTCIPNSQPWQAALLANRQFRCGGVLLSNRWVLTAAHCNHWNLRVVLGKHNIRLLE |
TAN.....EKIIGG.TCIPNSQPWQAALLAN.QFRCGGVLLSNRWVLTAAH.NHWNLRVVLGKHNIR.LE | |
Retrocopy | TANAGRNGEKIIGGHTCIPNSQPWQAALLANQQFRCGGVLLSNRWVLTAAHWNHWNLRVVLGKHNIRRLE |
Parental | PSQQSVGVERRVPHPSYSPRTSNNDLMLLYLEKPVKLTNQVKPIQLAKNCANPGTDCLVSGWGTVSSPFA |
PSQQS.GVE..VPHPSY.PRTSNNDLMLLYLEKPVKLTNQV.PIQLAKNCANPGTDCLVS.WGTVSSPFA | |
Retrocopy | PSQQSIGVEG*VPHPSYGPRTSNNDLMLLYLEKPVKLTNQVQPIQLAKNCANPGTDCLVSSWGTVSSPFA |
Parental | RYPSTLQCLKISIFSEESCKNAYYGKAITPGMVCAGDKKGGKDSCQGDSGGPLVCNGVLQGLVSWGMEHC |
.YPSTLQCLKISIFSEESCKNAYYGK.ITPGMV.AGDKKGGKDSCQGDSGGPLVCNGVLQGLVSWGMEHC | |
Retrocopy | KYPSTLQCLKISIFSEESCKNAYYGKVITPGMVSAGDKKGGKDSCQGDSGGPLVCNGVLQGLVSWGMEHC |
Parental | ALPGYPGVYTNLCRYRTWILNEMQKN |
ALPGYPGVYTNLC.YRTWILNE.QKN | |
Retrocopy | ALPGYPGVYTNLCSYRTWILNEIQKN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Macropus eugenii | ENSMEUG00000001969 | 7 retrocopies |
retro_meug_1025, retro_meug_1028, retro_meug_1038, retro_meug_1108, retro_meug_1959 , retro_meug_2018, retro_meug_707,
|
Macropus eugenii | ENSMEUG00000014123 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000020815 | 1 retrocopy |