RetrogeneDB ID: | retro_meug_2038 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold82107:10542..10927(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SUB1 | ||
Ensembl ID: | ENSMEUG00000007770 | ||
Aliases: | None | ||
Description: | SUB1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:19985] |
Percent Identity: | 82.17 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MPKSKELVSSSSSGS--DSDSEIDKK-AKRKKQALPEKPIKKQKTGESSKAPASSKQSSSRDDHMFQIGK |
MPKSKELVSSSSS.S..DS..E...K....KKQALP.KPIKKQ.TGESSKAPAS.K.SSS.DDH.FQIGK | |
Retrocopy | MPKSKELVSSSSSESDTDSEIEKKAK>SLKKKQALPGKPIKKQRTGESSKAPASFKKSSSQDDHIFQIGK |
Parental | MRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL |
MRYV.VR.FKGK.L.DIREYWMDQEGEMKPGRKG.SLNPEQWSQLKEQISDIDDAVRKL | |
Retrocopy | MRYVRVRGFKGKILTDIREYWMDQEGEMKPGRKGLSLNPEQWSQLKEQISDIDDAVRKL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |