RetrogeneDB ID: | retro_meug_2081 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold87975:7196..7512(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | WDR83OS | ||
Ensembl ID: | ENSMEUG00000014450 | ||
Aliases: | None | ||
Description: | WD repeat domain 83 opposite strand [Source:HGNC Symbol;Acc:30203] |
Percent Identity: | 77.78 % |
Parental protein coverage: | 99.06 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | SANNMSDPRRP-NKVLRYKP-PASENNPALEDPTPDYMNLLGMIFSMCGLMLKLKWCAWIAVYCSFISFA |
S.NNM.DP..P.NKVLRYK...A.ENN.ALED.T.DYMNLLGMIFS.C.LMLKLKW.AWI.VY.SFISFA | |
Retrocopy | SMNNMLDPYGP<NKVLRYKS<TATENNLALEDLTLDYMNLLGMIFSICDLMLKLKWYAWIEVYYSFISFA |
Parental | NSRSSEDTKQMMSSFMLSISAVVMS-YLQNPQPMTPPW |
NS.SSEDTKQMMSSFMLSISAVVMS.YL...QP.TP.W | |
Retrocopy | NSQSSEDTKQMMSSFMLSISAVVMSSYL*TLQPLTPIW |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000028908 | 2 retrocopies | |
Callithrix jacchus | ENSCJAG00000005285 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000019481 | 1 retrocopy | |
Felis catus | ENSFCAG00000000463 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000014450 | 3 retrocopies |
retro_meug_1695, retro_meug_1733, retro_meug_2081 ,
|
Mus musculus | ENSMUSG00000059355 | 2 retrocopies | |
Pteropus vampyrus | ENSPVAG00000013403 | 1 retrocopy | |
Sus scrofa | ENSSSCG00000013721 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000001250 | 1 retrocopy |