RetrogeneDB ID: | retro_meug_2189 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold99966:4494..4794(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMEUG00000005945 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EIF1 | ||
Ensembl ID: | ENSMEUG00000015360 | ||
Aliases: | None | ||
Description: | eukaryotic translation initiation factor 1 [Source:HGNC Symbol;Acc:3249] |
Percent Identity: | 79. % |
Parental protein coverage: | 88.5 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | ADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVI |
.DA.K.DDLLPAGTEDYIH.RIQQRNGRKT.TTVQGIADD.DKKKLVKAFKK..AC.G..IEHP.YGEVI | |
Retrocopy | SDATKEDDLLPAGTEDYIHRRIQQRNGRKTFTTVQGIADDDDKKKLVKAFKKRLACSGAGIEHPQYGEVI |
Parental | QLQGDQRKNICQFLVEIGLAKDDQLKVHGF |
QLQGDQ.KN.CQFL...GLAKD.QL...GF | |
Retrocopy | QLQGDQLKNTCQFLIGAGLAKDHQLRFMGF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |