RetrogeneDB ID: | retro_meug_296 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | GeneScaffold_9796:19689..20162(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSMEUG00000004661 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 80. % |
Parental protein coverage: | 86.34 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | PLCLLCSAGSSSA-APHPL-RMYACTKLISAPALVRSSSQLLSRPLSAVVLKRPEVRTDENLSILAASGP |
P.CLLCSA..SSA..P.PL.R..AC.K.IS..ALVRSSSQLLSRPLS.V.LK.PEV.TDEN.SIL.ASGP | |
Retrocopy | PHCLLCSASNSSA>CPLPL>RI*ACAKFISTLALVRSSSQLLSRPLSSV-LKWPEVQTDENFSILSASGP |
Parental | LTSLVPRCGFQTSAVSRDVDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG |
LTSLVPRCGFQTSA.SRD.DTA.KFIGAGAATV.VA.SGAGIGTVFGSLIIG...NPSLKQQLFSY.IL. | |
Retrocopy | LTSLVPRCGFQTSAESRDIDTATKFIGAGAATVWVADSGAGIGTVFGSLIIGNTNNPSLKQQLFSYPILN |
Parental | FALSEAMGLFCLMVAFLILF |
FA..EAMGLFCLM.AFLILF | |
Retrocopy | FAQPEAMGLFCLMMAFLILF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |