RetrogeneDB ID: | retro_meug_37 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold26541:24474..25065(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMEUG00000000058 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMEUG00000004807 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 94.83 % |
Parental protein coverage: | 65.17 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPD |
KLV.VGDGACGKTCLLIVFSKD.FPEVYVPTVFENY.ADIEVDGKQVELALWDTAGQEDYDRLRPLSYPD | |
Retrocopy | KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPD |
Parental | TDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR |
TDVILMCFS.DSPDSLENIPEKW.PEVKHFCPNVPIILV.NKKDLR | |
Retrocopy | TDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000014299 | 1 retrocopy | |
Canis familiaris | ENSCAFG00000013413 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000013657 | 2 retrocopies | |
Equus caballus | ENSECAG00000010174 | 3 retrocopies | |
Ficedula albicollis | ENSFALG00000000736 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000002741 | 2 retrocopies | |
Macropus eugenii | ENSMEUG00000004807 | 1 retrocopy |
retro_meug_37 ,
|
Monodelphis domestica | ENSMODG00000000981 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000027678 | 3 retrocopies | |
Pongo abelii | ENSPPYG00000010686 | 2 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000001981 | 1 retrocopy | |
Taeniopygia guttata | ENSTGUG00000017533 | 1 retrocopy | |
Tetraodon nigroviridis | ENSTNIG00000015041 | 1 retrocopy | |
Xenopus tropicalis | ENSXETG00000006898 | 1 retrocopy | |
Xiphophorus maculatus | ENSXMAG00000008103 | 1 retrocopy |