RetrogeneDB ID: | retro_meug_489 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold122272:1068..1382(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMEUG00000014912 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 71.7 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | VNVPKTCRTFCKKCGKHQPHQVTQYKKG-KDSLYAQGKRRYDLKQSDYGGQTKPIFQKKAKTTKKIVLRL |
VNVPK..RT.CKKCGKHQPH.......G....L.AQ.K.RY.LKQS..G.QT.PIF.KKA.TTKKIVLRL | |
Retrocopy | VNVPKSRRTYCKKCGKHQPHKGDAVQEG<VRTLKAQSKWRYELKQSG*GSQTNPIFSKKAETTKKIVLRL |
Parental | ERVEPNCRSKRMLAIKRRKHFELGGDKKRKGQVIQF |
E..EP.CRSKRMLAIKR.KHFELGGDKKRK..VIQF | |
Retrocopy | ECMEPTCRSKRMLAIKRCKHFELGGDKKRKREVIQF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Anolis carolinensis | ENSACAG00000008503 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000014912 | 6 retrocopies |
retro_meug_1056, retro_meug_1381, retro_meug_1610, retro_meug_1979, retro_meug_2185, retro_meug_489 ,
|
Monodelphis domestica | ENSMODG00000025578 | 2 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000013479 | 1 retrocopy |