RetrogeneDB ID: | retro_meug_519 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold128725:8675..8958(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CENPV | ||
Ensembl ID: | ENSMEUG00000002027 | ||
Aliases: | None | ||
Description: | centromere protein V [Source:HGNC Symbol;Acc:29920] |
Percent Identity: | 75.79 % |
Parental protein coverage: | 51.65 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | EYQGLVKHTGGCHCGAVRFEVWASADLHVFDCNCTICKKKQNRHFIVPASRFKLLKGAENITTYTFNTHK |
..Q.LVKHTG.CHC..V.F.V.A..DL..FD.NC.ICKKKQN.HFIVPA..FKLLKGAE.ITTYTFNTHK | |
Retrocopy | KFQDLVKHTGSCHCVVVHFGV*AVVDLQFFDYNCSICKKKQN*HFIVPAHCFKLLKGAEKITTYTFNTHK |
Parental | AQHTF-CKSCGVQSFYTPRSNPDGY |
AQHTF..KSCGVQSFYT..SNPDGY | |
Retrocopy | AQHTF>AKSCGVQSFYTSLSNPDGY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000004716 | 5 retrocopies | |
Canis familiaris | ENSCAFG00000018019 | 2 retrocopies | |
Homo sapiens | ENSG00000166582 | 3 retrocopies | |
Macropus eugenii | ENSMEUG00000002027 | 1 retrocopy |
retro_meug_519 ,
|
Microcebus murinus | ENSMICG00000007166 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000010146 | 2 retrocopies | |
Nomascus leucogenys | ENSNLEG00000014726 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000029365 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000008810 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000012221 | 2 retrocopies |