RetrogeneDB ID: | retro_meug_596 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold14382:7668..8145(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CREB1 | ||
Ensembl ID: | ENSMEUG00000007374 | ||
Aliases: | None | ||
Description: | cAMP responsive element binding protein 1 [Source:HGNC Symbol;Acc:2345] |
Percent Identity: | 68.55 % |
Parental protein coverage: | 51.49 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | ITQGGAIQLANNGTDGVQGLQTLTMTNAAATQASTTILQYAQTTDGQQILVPSNQVVVQAASGDVQTYQI |
....G..QLA...TDG.QGLQ.LTMTNA..TQ..TTILQYAQT.DGQQILVPSNQVVVQ..SGD.QTYQI | |
Retrocopy | LAPNGTWQLASPSTDGLQGLQALTMTNASNTQQGTTILQYAQTSDGQQILVPSNQVVVQTTSGDMQTYQI |
Parental | RTAPTSTIAPGVVMASSPAL---PTQPAEEAARKREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQ |
...P..T..P..V....P......T........KRE.RLMKNREAARECRRKKKEYVKCLENRVAVLENQ | |
Retrocopy | HATPANTDLPQTVVMTPPVTITSETTATDDPQMKREMRLMKNREAARECRRKKKEYVKCLENRVAVLENQ |
Parental | NKTLIEELKALKDLYCHKS |
NKTLIEELKA.KDLY.HK. | |
Retrocopy | NKTLIEELKAFKDLYSHKN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Macropus eugenii | ENSMEUG00000007374 | 3 retrocopies |
retro_meug_1195, retro_meug_2029, retro_meug_596 ,
|
Rattus norvegicus | ENSRNOG00000013412 | 1 retrocopy |