RetrogeneDB ID: | retro_meug_794 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold18958:9132..9843(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMEUG00000005942 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 73.33 % |
Parental protein coverage: | 54.84 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | RDNDKTRYMGKGVSKAVEHINKTIAPTLISKKLNVVEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVC |
.DN..TRY..KGV.K.VEHINKT.A..LISKKLNV.EQ.K..KLMIEMD..ENKS.FGANA.L.VSLAV. | |
Retrocopy | KDNNETRYTEKGVPKTVEHINKTVASILISKKLNVMEQKKTGKLMIEMDDFENKSNFGANALLRVSLAVR |
Parental | KAGAAEKGVSLYRHIADLAGNDEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFKEAMRIGAEVY |
KAGA..KGVSLY.HIADLAGNDE.ILP.PAFNVINGGSH..NKLAMQEF.IL.VGAANF...M.IG.EV. | |
Retrocopy | KAGAGKKGVSLYYHIADLAGNDEAILPLPAFNVINGGSHGDNKLAMQEFIILSVGAANFNKTMCIGSEVN |
Parental | HNLKSVIKQKYGQDATNVGDEGGFAPNILENKE-ALDLLKDAIGKAGYTDKVVIGMD-VAASEFFRSGKY |
HNL...IK..YGQD.TNVGD.GGFA..ILE.K...L.LLK.AIGKAGYT.KVVI.MD.VAASEFF..GKY | |
Retrocopy | HNLMNMIKHYYGQDTTNVGDTGGFALKILESKD<LLELLKNAIGKAGYTNKVVIVMD>VAASEFF*FGKY |
Parental | DLDFKSPDDSSRYISPSELGDLYKSFIKDY |
DL.FK...DS.RYIS..ELG.LYK.FIKDY | |
Retrocopy | DLNFKF-HDSRRYISLFELGILYKTFIKDY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |