RetrogeneDB ID: | retro_meug_873 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold21533:37201..37591(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RBM8A | ||
Ensembl ID: | ENSMEUG00000016058 | ||
Aliases: | None | ||
Description: | RNA binding motif protein 8A [Source:HGNC Symbol;Acc:9905] |
Percent Identity: | 80. % |
Parental protein coverage: | 99.24 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | EGSRARMREDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEYGEIKNIHLNLDRRTGYL |
E.S.ARM.EDYD.VEQDGDEPGPQRSVEGWILFVTG.H.EATEEDIHDK...YG.I..IH.N.DRRTG.L | |
Retrocopy | E*SLARMWEDYDIVEQDGDEPGPQRSVEGWILFVTGIHNEATEEDIHDKVAGYGQIQTIHVNMDRRTGCL |
Parental | KGYALVEYETYKEAQAAMEGLNGQDMMGQPISVDWCFVRGPPKGKRRGGRRRSRSPDRRR |
KGY.LVEYETYK.AQAA.EGLNGQD.MGQPISVDWCFVRG.PKG.RR.G.R.SRSPD.R. | |
Retrocopy | KGYSLVEYETYKDAQAALEGLNGQDRMGQPISVDWCFVRGLPKG*RRSG*RWSRSPDLRQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dasypus novemcinctus | ENSDNOG00000016021 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000008411 | 1 retrocopy | |
Felis catus | ENSFCAG00000026379 | 1 retrocopy | |
Homo sapiens | ENSG00000131795 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000016058 | 2 retrocopies |
retro_meug_873 , retro_meug_952,
|
Myotis lucifugus | ENSMLUG00000017436 | 2 retrocopies | |
Mus musculus | ENSMUSG00000038374 | 2 retrocopies | |
Otolemur garnettii | ENSOGAG00000000202 | 2 retrocopies | |
Ochotona princeps | ENSOPRG00000013316 | 2 retrocopies | |
Rattus norvegicus | ENSRNOG00000021215 | 2 retrocopies | |
Sorex araneus | ENSSARG00000013289 | 2 retrocopies | |
Tupaia belangeri | ENSTBEG00000014947 | 2 retrocopies |