RetrogeneDB ID: | retro_meug_899 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold22414:34778..35285(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMEUG00000004885 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 87.57 % |
Parental protein coverage: | 52.16 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | IAIRESAKVVDQAQRRVLRGVDDLDFFIGDEAIDKPTYATKWPIRHGIIEDWDLMERFMEQVIFKYLRAE |
IAI.ESAKV.DQAQRRV..GVDDLDFF..DEAI.KPTYATKWP.RHGI.ED.DLMERFMEQVIFKYLR.E | |
Retrocopy | IAIKESAKVGDQAQRRVMKGVDDLDFFPEDEAIEKPTYATKWPVRHGIVED*DLMERFMEQVIFKYLRVE |
Parental | PEDHYFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGV |
.EDHYFL.TEPPLNTPENREY..EIMFESFNVPGLYIAVQAVLALA.SWTSRQVGER.LTG.VIDSGDGV | |
Retrocopy | LEDHYFL*TEPPLNTPENREYAVEIMFESFNVPGLYIAVQAVLALATSWTSRQVGERRLTGTVIDSGDGV |
Parental | THVIPVAECYVIGSCIKHIPIAGRDITYF |
THVIPVAE.YVIGSCIKHIPIAGRDIT.. | |
Retrocopy | THVIPVAEGYVIGSCIKHIPIAGRDITFY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000007730 | 5 retrocopies | |
Dasypus novemcinctus | ENSDNOG00000019288 | 2 retrocopies | |
Homo sapiens | ENSG00000133627 | 7 retrocopies | |
Macropus eugenii | ENSMEUG00000004885 | 5 retrocopies | |
Nomascus leucogenys | ENSNLEG00000015688 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000000459 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000003249 | 2 retrocopies | |
Pongo abelii | ENSPPYG00000018206 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000019897 | 8 retrocopies | |
Tupaia belangeri | ENSTBEG00000011647 | 2 retrocopies | |
Tursiops truncatus | ENSTTRG00000016334 | 2 retrocopies |