RetrogeneDB ID: | retro_meug_96 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | GeneScaffold_2146:16497..17322(-) | ||
Located in intron of: | ENSMEUG00000005654 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMEUG00000007840 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 80.36 % |
Parental protein coverage: | 89.58 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | LACKEEIILPVPAFNVINGGSHAGNKLAMQEFMILPIGAENFREAMRIGSEVYHNLKSVIKQKYGQDATN |
L.C.....LPV.AFNVING.SHAGNKLAMQEFMIL..GA.N..EAMRIG.EVYHNLKSVIKQK.GQDATN | |
Retrocopy | LYCHIADLLPVSAFNVINGASHAGNKLAMQEFMILSVGATNCKEAMRIGAEVYHNLKSVIKQK*GQDATN |
Parental | VGDEGGFAPNILENKEALELLKEAIAKAGYTEHVVIGVGVAASEFYRDGKYDLEFKSPDDPSKPITSEDL |
V.DEGGFAPNILENKEAL.LLK.AI.KAGYT..VVIG..VAASEF.R.GKYDL.FKSPDD.S..I...DL | |
Retrocopy | VRDEGGFAPNILENKEALDLLKDAIGKAGYTDKVVIGMDVAASEFFRSGKYDLDFKSPDDSSSYISPSDL |
Parental | SSLYKSFIKDYPVVSIEDPFDQDDWESWKDFTASVDIQVVGDDLTVTNRTRIRKAIKEKSCNCLLLKVNQ |
..LYKSFIKDYPVVS.EDPFDQDD.E.WK.FTA...IQVVGDDLTVTN..R..KA..EK.CNCLLLKVNQ | |
Retrocopy | GDLYKSFIKDYPVVSTEDPFDQDDREAWKNFTATASIQVVGDDLTVTNPKRNKKAVNEKACNCLLLKVNQ |
Parental | IGTVTESIQACRLAQSSGWGVMVSHRSGETEDTFIADLAVGLCTGQIKTGAPCRSERLAKYNQLL |
.G.VTES.QAC.LAQS.GWGVMVSHRSGETEDTFIADL.VGLCTGQIKTGAPCRSERLAKYNQLL | |
Retrocopy | TGSVTESLQACKLAQSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |