RetrogeneDB ID: | retro_mluc_1293 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429815:6908930..6909271(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000023650 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PFDN2 | ||
Ensembl ID: | ENSMLUG00000004526 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 87.29 % |
Parental protein coverage: | 91.41 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | QRGLASKAAELEMELNEHSL-VIDTLKEVDETRKCFRMVGGVLVERTVKEVLPALENNKEQIQKIIETLT |
QRGLASKAAELEMEL.EHS..VI.TLKE.DET.K.FRMVGGVL.ERTVKE.LPA.ENNKE...KIIETLT | |
Retrocopy | QRGLASKAAELEMELKEHSQ<VIHTLKETDETHKYFRMVGGVLMERTVKEALPASENNKE---KIIETLT |
Parental | QQLQAKGKELNEFREKHNIRLMGEDEKPAKENSEGAGAKASSAGVLVS |
QQLQAKGKELNEFREK.NIRLMGEDEKPAKENSEGAGAKASSA.VLVS | |
Retrocopy | QQLQAKGKELNEFREKQNIRLMGEDEKPAKENSEGAGAKASSARVLVS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dipodomys ordii | ENSDORG00000004588 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000004526 | 1 retrocopy |
retro_mluc_1293 ,
|
Mus musculus | ENSMUSG00000006412 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000015982 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000009181 | 1 retrocopy |