RetrogeneDB ID: | retro_mputfur_1473 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897154.1:861636..862018(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FBXO27 | ||
Ensembl ID: | ENSMPUG00000017748 | ||
Aliases: | None | ||
Description: | F-box protein 27 [Source:HGNC Symbol;Acc:18753] |
Percent Identity: | 73.28 % |
Parental protein coverage: | 60.56 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | VSSFSWCRKKQVLDLEEEGLWPELLDSGKIEICVSD-WWGARHDSGCMYRLLVQLLDANQTVLDKFSAMP |
.SS...CR.KQVLDLEEEGLWPELLD..K.EICV...W.G..H...CMYRLLVQLLD.NQTVLDKFSA.P | |
Retrocopy | MSSLGLCR*KQVLDLEEEGLWPELLDNDKTEICVPG<W-GD*HNNDCMYRLLVQLLDGNQTVLDKFSAVP |
Parental | VPIQQWNNNVCFQVTHVFSNIKMGVRFVSFEHWGQDTQFWAGHYGARVT-NSSVVVRAQLS |
.PIQQWNNNV.FQVTHVFSN.KMGV.F.SF.HW.QD.QFW...Y.A.VT..SSVVV.AQLS | |
Retrocopy | IPIQQWNNNVFFQVTHVFSNVKMGVCFMSFQHWDQDRQFWVSQYEAHVT<HSSVVVQAQLS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Cavia porcellus | ENSCPOG00000004611 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000017748 | 3 retrocopies |
retro_mputfur_1473 , retro_mputfur_465, retro_mputfur_965,
|
Ictidomys tridecemlineatus | ENSSTOG00000027765 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000010522 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000009850 | 1 retrocopy | |
Vicugna pacos | ENSVPAG00000004974 | 1 retrocopy |