RetrogeneDB ID: | retro_mputfur_965 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896982.1:263448..263999(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FBXO27 | ||
Ensembl ID: | ENSMPUG00000017748 | ||
Aliases: | None | ||
Description: | F-box protein 27 [Source:HGNC Symbol;Acc:18753] |
Percent Identity: | 69.89 % |
Parental protein coverage: | 86.38 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | LLGRFCERRPIGRNLIRNPCGQEGLRKWMVQHGGDGWVVEVNRSTVPGAPSQTCFVSSFSWCRKKQVLDL |
LL.RFC..R..GR.L..NPCGQEGL..W.VQHGGDGWVVEVN...VPGAPSQ.CFVSS..WC.KKQVLDL | |
Retrocopy | LLSRFCKLRQFGRSLLLNPCGQEGLQGWTVQHGGDGWVVEVNLTQVPGAPSQNCFVSSYKWCSKKQVLDL |
Parental | EEEGLWPELLDSGKIEICVSD-WWGARHDSGCMYRLLVQLLDANQTVLDKFSAMPVPIQQWNNNVCFQVT |
.EEGLWPELLDSGKIEICVS..W.GAR.D.GC.YRLLVQLLDA...VLD.FS..P.P.QQ.NN..CFQVT | |
Retrocopy | VEEGLWPELLDSGKIEICVSG<W-GARDDYGCVYRLLVQLLDARLNVLDEFSSSPDPVQQGNNHFCFQVT |
Parental | HVFSNIKMGVRFV-SFEHWGQDTQFWAGHYGARVTNSSVVVRAQLS |
HVFSNIK.G......F...G........HYGA.VTNSSVVVRA.LS | |
Retrocopy | HVFSNIKTGMHALWVFQTLGPGHAVLGWHYGACVTNSSVVVRA*LS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Cavia porcellus | ENSCPOG00000004611 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000017748 | 3 retrocopies |
retro_mputfur_1473, retro_mputfur_465, retro_mputfur_965 ,
|
Ictidomys tridecemlineatus | ENSSTOG00000027765 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000010522 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000009850 | 1 retrocopy | |
Vicugna pacos | ENSVPAG00000004974 | 1 retrocopy |