RetrogeneDB ID: | retro_nleu_516 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397266.1:22968652..22969607(-) | ||
Located in intron of: | ENSNLEG00000014330 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DPF2 | ||
Ensembl ID: | ENSNLEG00000005574 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 86.02 % |
Parental protein coverage: | 81.84 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | YSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLEALLRTDPLEKRGAPDPRVDDD |
YSYPAR.W.KKR.AHP.EDP.LSFP.IKPDTD.TLKKEGLISQD.SSLE.LL.TDPLEK.GAPDPRVDDD | |
Retrocopy | YSYPARHWWKKR*AHPQEDPQLSFPPIKPDTDHTLKKEGLISQDSSSLEVLLHTDPLEKQGAPDPRVDDD |
Parental | SLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRRGKGKSKGKGV-GSARKKLDASILEDRDKPYA |
SLG.FPVTNS.A.KRILEPDDFLD.LDDED.EED.PKR.GKG.SKGKGV.GSARK.LDAS.LED.DKPYA | |
Retrocopy | SLGKFPVTNSQAQKRILEPDDFLDNLDDEDCEEDAPKRQGKG*SKGKGV<GSARKELDASNLEDQDKPYA |
Parental | CDICGKRYKNRPGLSYHYAHSHLAEEEGEDKEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDS |
CD.CGKRYKNRPGLSYHYAHSHLA.EEGEDKEDSQPPTP.SQ.SEEQKSKKGPDGLALPNNYC.FCLG.S | |
Retrocopy | CDVCGKRYKNRPGLSYHYAHSHLA-EEGEDKEDSQPPTPLSQKSEEQKSKKGPDGLALPNNYCNFCLGNS |
Parental | KINKKTGQPEELVSCSDCGRSGHPSCLQFTPVMM-AAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCD |
KINKK.GQPEELVSC.DCG.SGHPSCL.FTP.MM...VKTY.WQCIECKCC.ICGTSE.DDQL.FCDDCD | |
Retrocopy | KINKKMGQPEELVSCFDCGCSGHPSCLHFTPMMM<GTVKTYCWQCIECKCCDICGTSEDDDQLGFCDDCD |
Parental | RGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKASIYQNQNSS |
.GY.MYCLTPS.SEPPEGSW.CHLCLDLLKEKASIYQNQNSS | |
Retrocopy | HGYQMYCLTPSISEPPEGSWRCHLCLDLLKEKASIYQNQNSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Felis catus | ENSFCAG00000023858 | 1 retrocopy | |
Homo sapiens | ENSG00000133884 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000012317 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000005574 | 1 retrocopy |
retro_nleu_516 ,
|
Tarsius syrichta | ENSTSYG00000000038 | 1 retrocopy |