RetrogeneDB ID: | retro_ttru_1203 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_107087:7342..7693(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MRPS10 | ||
Ensembl ID: | ENSTTRG00000014063 | ||
Aliases: | None | ||
Description: | mitochondrial ribosomal protein S10 [Source:HGNC Symbol;Acc:14502] |
Percent Identity: | 84.43 % |
Parental protein coverage: | 59.5 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | MAARTAFGPLG-RRLWQ-GSRNFSVCSSRSSTAKNGGLLLSTNMKWVQFSNLHVDVPKDLTKPTITVSDE |
MAAR.AFGPLG..RLWQ.GSRNFSVCS.RSSTAKNGG.LL.TNMKWVQFSNLH.DVPKDL.K.TIT..DE | |
Retrocopy | MAARAAFGPLG<MRLWQ<GSRNFSVCSYRSSTAKNGGILL-TNMKWVQFSNLHIDVPKDLPKLTITI*DE |
Parental | PDTLYKRLSVLVKGHDKAVLDSYEY-FAALAAKELGISVKVHEPPRKIERFT |
PDTLYK.LSVLVKGHDK.VLDSYEY.F.ALAAKELGISVKVHEPPRKI..F. | |
Retrocopy | PDTLYK*LSVLVKGHDKVVLDSYEY<FVALAAKELGISVKVHEPPRKILLFS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000001638 | 1 retrocopy | |
Choloepus hoffmanni | ENSCHOG00000006109 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000006067 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000014661 | 1 retrocopy | |
Mus musculus | ENSMUSG00000034729 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000004800 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000022609 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000014063 | 1 retrocopy |
retro_ttru_1203 ,
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