RetrogeneDB ID: | retro_ttru_1265 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_109033:9120..9699(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SSU72 | ||
Ensembl ID: | ENSTTRG00000017051 | ||
Aliases: | None | ||
Description: | SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25016] |
Percent Identity: | 60.62 % |
Parental protein coverage: | 99.48 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYNDLLR |
MPSSPLRVAVVC..N.NRSMEAH.IL.K..FSVR.FG.G.....P..AP..P..YDF.T....M..DL.. | |
Retrocopy | MPSSPLRVAVVCMRNINRSMEAHSILRKKSFSVRFFGMGSLMRFPRLAPKEPVAYDFSTSCNMMQKDLSC |
Parental | KDKELYTQNGILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDLNSREQETCQPVHVINVD |
KD...Y..NG.LH.L.R..RIKP.PERFQ.C.D.FD.I.TC.ERVY..VV.....R.QET.QPVHVINVD | |
Retrocopy | KDQKYYKGNGVLHILKRSDRIKPHPERFQECRDPFDVIFTCAERVYNRVVAAMCARDQETWQPVHVINVD |
Parental | IQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRTFLHTVCF |
I.D..E.ATLG...ICELCQ..Q..EDME....ELLQ...EK.G..FLHTVCF | |
Retrocopy | IEDTLELATLGSLIICELCQGLQQVEDMEGSLAELLQAEKEKTGGNFLHTVCF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |