RetrogeneDB ID: | retro_ttru_1292 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_109848:71052..71331(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | HIGD1A | ||
Ensembl ID: | ENSTTRG00000009760 | ||
Aliases: | None | ||
Description: | HIG1 hypoxia inducible domain family, member 1A [Source:HGNC Symbol;Acc:29527] |
Percent Identity: | 84.95 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MSSDTDVSLSSYDEGQGSKLIRKAREAPFVPIGMAGFAAIVAYGLYKLKSRGNTKMSV-LIHMRVAAQGF |
MSSDTD.SLSSYDE..GSKLI.KAREA.FVP.GMAGFA.IVAY.LYKLKSRGNTKMSV.LIHM..AAQGF | |
Retrocopy | MSSDTDDSLSSYDEDHGSKLIQKAREASFVPTGMAGFATIVAYRLYKLKSRGNTKMSVHLIHMCMAAQGF |
Parental | VVGAMTLGMGYSMYQEFWAKPKP |
VVG.MTLGMG.SMY.EFWAKPKP | |
Retrocopy | VVGTMTLGMGDSMYREFWAKPKP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |