RetrogeneDB ID: | retro_ttru_13 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_89726:78156..78906(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSTTRG00000015118 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SPIN1 | ||
Ensembl ID: | ENSTTRG00000005602 | ||
Aliases: | None | ||
Description: | spindlin 1 [Source:HGNC Symbol;Acc:11243] |
Percent Identity: | 75. % |
Parental protein coverage: | 86.64 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | KKHRSSVGPSKPVSQPRRNIVGCRIQHGWKEGNGPITQWKGTVLDQVPVNPSLYLIKYDGFDCVYGLELN |
K.H.......KP....RRNIVGCRIQHGWKEGN.P..QWKGTVL.QV.V.P.LY.IKYDG.D.VYGLEL. | |
Retrocopy | KRHTHRKQRRKPTFLTRRNIVGCRIQHGWKEGNEPVEQWKGTVLEQVSVKPTLYIIKYDGKDSVYGLELH |
Parental | KDERVSALEVLPDRVATSRISDAHLADTMIGKAVEHMFETEDGSKDEWRGMVLARAPIMNTWFYITYEKD |
.D.RV.ALE.LP.RV.T.RI.D..LAD..IGKAV.H.FE.E.G.KDEW.GMVLARAP.M.TWFYITYEKD | |
Retrocopy | RDKRVLALEILPERVPTPRI-DSRLADSLIGKAVGHVFEGEHGTKDEWKGMVLARAPVMDTWFYITYEKD |
Parental | PVLYMYQLLDDYKEGDLRIMPDSN-DSPPAEREPGEVVDSLVGKQVEYAKEDGSKRTGMVIHQVEAKPSV |
PVLYMY.LLDDYK.GDLRI.PDSN...P.AEREPGEVVDSLVGKQVE.AK.DGSKRTG..IHQV.AKPSV | |
Retrocopy | PVLYMYTLLDDYKAGDLRIIPDSNYYFPTAEREPGEVVDSLVGKQVEHAKDDGSKRTGIFIHQVVAKPSV |
Parental | YFIKFDDDFHIYVYDLVK |
YFIKFDDD.HIYVY.LVK | |
Retrocopy | YFIKFDDDIHIYVYGLVK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |