RetrogeneDB ID: | retro_ttru_1367 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_111520:144147..144378(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTTRG00000004063 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 88.31 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MPKCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGSHAEHEGKPYCNHPCYAAMFGPKGFGRGG |
MPKCPKCNKEVYFAERVTSLGKDWH.PCLKCEK.GKTLTS..HAEHEGKPYC.HPCYAA.F.PKGF..GG | |
Retrocopy | MPKCPKCNKEVYFAERVTSLGKDWHHPCLKCEKRGKTLTSRGHAEHEGKPYCTHPCYAAIFSPKGFRHGG |
Parental | AESHTFK |
AESHTFK | |
Retrocopy | AESHTFK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000047229 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000019788 | 1 retrocopy | |
Dipodomys ordii | ENSDORG00000001365 | 1 retrocopy | |
Homo sapiens | ENSG00000213145 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000027381 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000001631 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000007158 | 2 retrocopies | |
Pongo abelii | ENSPPYG00000006209 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000033768 | 1 retrocopy | |
Pteropus vampyrus | ENSPVAG00000014240 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000027990 | 2 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000000807 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000004063 | 1 retrocopy |
retro_ttru_1367 ,
|
Tursiops truncatus | ENSTTRG00000014596 | 1 retrocopy |