RetrogeneDB ID: | retro_ttru_1376 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_111647:152096..152508(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | OOEP | ||
Ensembl ID: | ENSTTRG00000001487 | ||
Aliases: | None | ||
Description: | oocyte expressed protein [Source:HGNC Symbol;Acc:21382] |
Percent Identity: | 86.43 % |
Parental protein coverage: | 98.57 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | DDAGAAEGRGDGLLGFLFTPPRIRSRPWWFPVQELRNPLVFSLEAWLADSIFGPDRAVVPEMEWMSQALL |
D.AGAAE..GDGLLGF...PPRIRSRPWWFPVQ.LRN.LVF.LEAWLADSIFGP.RAVVPEMEWMSQALL | |
Retrocopy | DYAGAAEALGDGLLGFPLPPPRIRSRPWWFPVQNLRNLLVFYLEAWLADSIFGPGRAVVPEMEWMSQALL |
Parental | TVDAVHAGKLVEITVFGRPAVQRRVKSVL-LSLASSHREKRARAEKMEQLEEF-LKAQAPRPQVPQSPVA |
TVDAVHAGKLVEITVFG.PAVQRRVKSVL.LSL..SHRE.RARAEKMEQLEEF.LKAQAP.PQ.PQ.PVA | |
Retrocopy | TVDAVHAGKLVEITVFGPPAVQRRVKSVL<LSLVPSHREQRARAEKMEQLEEF<LKAQAPGPQIPQRPVA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000009962 | 1 retrocopy | |
Homo sapiens | ENSG00000203907 | 3 retrocopies | |
Gorilla gorilla | ENSGGOG00000016832 | 3 retrocopies | |
Loxodonta africana | ENSLAFG00000012754 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000017174 | 2 retrocopies | |
Macaca mulatta | ENSMMUG00000000416 | 2 retrocopies | |
Nomascus leucogenys | ENSNLEG00000001204 | 2 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000025904 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000029545 | 3 retrocopies | |
Rattus norvegicus | ENSRNOG00000025957 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000001487 | 2 retrocopies |
retro_ttru_1376 , retro_ttru_1803,
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