RetrogeneDB ID: | retro_ttru_1381 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_111785:155146..155701(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTTRG00000005714 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 78.49 % |
Parental protein coverage: | 98.94 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | EAHGESQPDASCSSFTRDGSGVSVSRELLTAGSGGRGGIWDRLLINSKPNSRKNSTLQTVRIERSPLLDQ |
EAHG.SQPDASCSSF.RD.S.V.VSRELL..G.GGRGGIWDRLLINSK.NSRKNSTLQT.RIERSPLLDQ | |
Retrocopy | EAHGKSQPDASCSSFSRDSSRVLVSRELLMEGRGGRGGIWDRLLINSKRNSRKNSTLQTGRIERSPLLDQ |
Parental | VQSFLPQMAQANEKLRKEVAAAPPGHFNIENIDETVGKVIQMDVALFEMNQSDSKEEDSSEENSQDCSED |
VQSFLPQMAQAN.KLRK....APPGHFNIENID.T.GKV.QMD..LFEMNQSDSK............... | |
Retrocopy | VQSFLPQMAQANKKLRKGISTAPPGHFNIENID-TLGKVMQMDMILFEMNQSDSKXXXXXXXXXXXXXXX |
Parental | SSEFEDEDDSTSSEGEVTIDTIKLPHSEDGKGKIEVLDHPASEKKK |
...FEDEDDSTSSE.EVTIDTIKLPHSEDGKGKIEVLD.PASEKKK | |
Retrocopy | XXXFEDEDDSTSSEREVTIDTIKLPHSEDGKGKIEVLDRPASEKKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000014728 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000017235 | 1 retrocopy | |
Homo sapiens | ENSG00000151131 | 1 retrocopy | |
Gallus gallus | ENSGALG00000012694 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000027272 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000017133 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000006584 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000004897 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000005381 | 1 retrocopy | |
Sus scrofa | ENSSSCG00000027792 | 2 retrocopies | |
Tursiops truncatus | ENSTTRG00000005714 | 1 retrocopy |
retro_ttru_1381 ,
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