RetrogeneDB ID: | retro_ttru_1447 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_113499:65880..66333(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FCF1 | ||
Ensembl ID: | ENSTTRG00000002440 | ||
Aliases: | None | ||
Description: | FCF1 rRNA-processing protein [Source:HGNC Symbol;Acc:20220] |
Percent Identity: | 88.74 % |
Parental protein coverage: | 76.26 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MGKQKKTRKYATMKRMLSLRDQRLKEKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYNTQLGPPYHIL |
MGKQKKTRKYATMK.M.SLRDQRL..............DPSALKEREVPQHPSCLFFQYNTQLGPPYHIL | |
Retrocopy | MGKQKKTRKYATMKLMVSLRDQRLXXXXXXXXXXXXXXDPSALKEREVPQHPSCLFFQYNTQLGPPYHIL |
Parental | VDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRVALRIAKDPRFERLPCTHKGTY |
VDTNFINFSIKAKLDLVQSMMDCLYAKCIPCIT.CVMAEIEKLGQKYRVALRIAKDPRFERLPCTHKGTY | |
Retrocopy | VDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITGCVMAEIEKLGQKYRVALRIAKDPRFERLPCTHKGTY |
Parental | ADDCLVQRVTQ |
ADDCLVQRVTQ | |
Retrocopy | ADDCLVQRVTQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |