RetrogeneDB ID: | retro_ttru_1524 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_115300:66429..67314(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DPPA2 | ||
Ensembl ID: | ENSTTRG00000009500 | ||
Aliases: | None | ||
Description: | developmental pluripotency associated 2 [Source:HGNC Symbol;Acc:19197] |
Percent Identity: | 95.93 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAHPNCEKNFFEEVLGEENMVLTLIPVNEEIVEDHLTEPSVSSTSEVKVESLSPDNQVHPPQTDEQFKAC |
MAHPNCEKNFFEEVLGEENMVLTLIPVNEEIVEDHL.EPSVSSTSEVKVESLS.D.QVHPPQTDEQFKAC | |
Retrocopy | MAHPNCEKNFFEEVLGEENMVLTLIPVNEEIVEDHLMEPSVSSTSEVKVESLSSDDQVHPPQTDEQFKAC |
Parental | STSSCSKPIYPLPTILPPINNVSRDTLRKWCQQLNLSTDGQKIEVYLRLQKHAYPEKDQYIPESSREARL |
..SSCSKPIYPLPTILPPINNVSRDTLRKW.QQLNLSTDGQKIEVYLRLQKHAYPEKDQYIPESSREARL | |
Retrocopy | PKSSCSKPIYPLPTILPPINNVSRDTLRKWYQQLNLSTDGQKIEVYLRLQKHAYPEKDQYIPESSREARL |
Parental | QSCPGKHKTVTKTASVQKRKMSENEERTNMVEVITSAQAAMLAAWSRIAARAVQPKAVNSRPLPTSVECF |
QSCPGKHKTVTKTASVQKRKMSENEERTNMVEVITSAQAAMLAAWSR.AARAVQPKAVNSRPLPTSVE.F | |
Retrocopy | QSCPGKHKTVTKTASVQKRKMSENEERTNMVEVITSAQAAMLAAWSRVAARAVQPKAVNSRPLPTSVESF |
Parental | LPQASGVRWCVVHGRPLLADTEGWVRLQFHACQTWVPNTPRRMISLFMLPACTFPSPDLED-MLCPECAK |
LPQASGVRWCVVHGRPLLADTEGWVRLQFHA.QTWVPNTPRRMISLFMLPACTFPSPDLED.MLCPECAK | |
Retrocopy | LPQASGVRWCVVHGRPLLADTEGWVRLQFHAGQTWVPNTPRRMISLFMLPACTFPSPDLEDNMLCPECAK |
Parental | RNKKIMKRLIAMGKK |
.NKKIMKRLIAMGK. | |
Retrocopy | GNKKIMKRLIAMGKR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |