RetrogeneDB ID: | retro_ttru_158 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_142:13472..13967(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPE | ||
Ensembl ID: | ENSTTRG00000000908 | ||
Aliases: | None | ||
Description: | ribulose-5-phosphate-3-epimerase [Source:HGNC Symbol;Acc:10293] |
Percent Identity: | 93.33 % |
Parental protein coverage: | 72.37 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | DPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTTVEYLAPWAN |
DPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENP.ALIKDIRENGMKVGLAIKPGTTVEYLAPWA. | |
Retrocopy | DPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPAALIKDIRENGMKVGLAIKPGTTVEYLAPWAH |
Parental | QIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTIHKCAEAGANMIVSGSAIMRS |
QIDMALVMT.E.GFGGQKFM.DMMPKVH.LRTQFPSLDIEVDGGVGPDTIHKC.EAGAN.IVSGSAIMRS | |
Retrocopy | QIDMALVMTLEAGFGGQKFMQDMMPKVH*LRTQFPSLDIEVDGGVGPDTIHKCTEAGANVIVSGSAIMRS |
Parental | EDPRSVINLLRNVCSEAAQKRSLDR |
EDPRSVINL.RNVC.EAAQKRSLD. | |
Retrocopy | EDPRSVINLSRNVCLEAAQKRSLDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |