RetrogeneDB ID: | retro_ttru_1620 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_73267:381..873(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | HPRT1 | ||
Ensembl ID: | ENSTTRG00000009954 | ||
Aliases: | None | ||
Description: | hypoxanthine phosphoribosyltransferase 1 [Source:HGNC Symbol;Acc:5157] |
Percent Identity: | 90.36 % |
Parental protein coverage: | 79.43 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | ISDDEPGYDLDLFCIPNHYAEDLEKVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLL |
.SD.EPGYDLD.FCIPNHYAEDLEKVFIPHGLIMDRTE.LA.DVMKEMGGHHIVALCVLKGGYKFF.DLL | |
Retrocopy | VSDNEPGYDLDSFCIPNHYAEDLEKVFIPHGLIMDRTEWLA*DVMKEMGGHHIVALCVLKGGYKFFVDLL |
Parental | DYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSL |
DYIKALN..SDRS.PMTVDFIRLKSYC.DQ.TGDIKVIGGDDL.T.TGK.VLIVEDIIDTGKTMQTLLSL | |
Retrocopy | DYIKALN--SDRSLPMTVDFIRLKSYCSDQPTGDIKVIGGDDLLTFTGKDVLIVEDIIDTGKTMQTLLSL |
Parental | VKQHNPKMVKVASLLVKRTPRSVGYR |
VKQ.NPKMVKVA.LLVKRTPRSVGYR | |
Retrocopy | VKQRNPKMVKVANLLVKRTPRSVGYR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |