RetrogeneDB ID: | retro_ttru_1685 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_85594:6301..6579(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL12 | ||
Ensembl ID: | ENSTTRG00000015700 | ||
Aliases: | None | ||
Description: | ribosomal protein L12 [Source:HGNC Symbol;Acc:10302] |
Percent Identity: | 75.53 % |
Parental protein coverage: | 56.36 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | VVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVSI-ARQMRHRSLARELSGTIKEILGTAQSVGC |
..PSAS.LIIKAL.EPP.DRKK.KNI..SGNITFD.IV...A.QMRH.SL.RE.SGTI..ILGTAQSVGC | |
Retrocopy | MIPSASSLIIKALEEPPTDRKKLKNITDSGNITFDYIVGM<A*QMRH*SLTRERSGTIQ*ILGTAQSVGC |
Parental | NVDGRHPHDIIDDINSGAVECPAS |
NVDG.HP.DI.DDINSG..ECPAS | |
Retrocopy | NVDGHHPYDIPDDINSGVMECPAS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |