RetrogeneDB ID: | retro_ttru_1691 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_86073:110308..110892(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FCF1 | ||
Ensembl ID: | ENSTTRG00000002440 | ||
Aliases: | None | ||
Description: | FCF1 rRNA-processing protein [Source:HGNC Symbol;Acc:20220] |
Percent Identity: | 83.67 % |
Parental protein coverage: | 98.48 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | QKKTRKYATMKRMLSLRDQRLKEKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYNTQLGPPYHI-LVD |
.KK.RKYATMKRMLSLRDQ.L...............PSALKEREVPQHPSCLFFQYNTQLGPPYHI.LVD | |
Retrocopy | KKKIRKYATMKRMLSLRDQKLXXXXXXXXXXXXXXXPSALKEREVPQHPSCLFFQYNTQLGPPYHI<LVD |
Parental | TNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRVALRIAKDPRFERLPCTHKGTYAD |
TNFINFSIKAKLDLVQSMMD.LYAKCIPCITDCVMAEIEKLGQK..VALRIAKDPRFERLPCTHKGTYA. | |
Retrocopy | TNFINFSIKAKLDLVQSMMDWLYAKCIPCITDCVMAEIEKLGQKC*VALRIAKDPRFERLPCTHKGTYAV |
Parental | DCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYISNHRYNIERMPDDYGAPRF |
DCLVQRVTQHKCYIVATVD.DLK.RI.KIPGVPIMYIS.HRYN.E..PDDYGA..F | |
Retrocopy | DCLVQRVTQHKCYIVATVDQDLKQRIWKIPGVPIMYISSHRYNTEWLPDDYGATWF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |