RetrogeneDB ID: | retro_ttru_1776 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_91224:125469..126193(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL7 | ||
Ensembl ID: | ENSTTRG00000009074 | ||
Aliases: | None | ||
Description: | ribosomal protein L7 [Source:HGNC Symbol;Acc:10363] |
Percent Identity: | 85.31 % |
Parental protein coverage: | 93.82 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | EKKKKVPAVPETLKKKRKNFAELRIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMA |
EKKKKVPA.PETLK.K.KNFAEL.IK.LRKKFAQKMLRKARRKLIYEKAKH.HK.YRQMYR..IRMARMA | |
Retrocopy | EKKKKVPAMPETLKGKQKNFAELKIKHLRKKFAQKMLRKARRKLIYEKAKHCHKGYRQMYRIQIRMARMA |
Parental | RKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAW-GY |
RKAGNF.VP.EPKLAFVIRIRGINGVSPKV.KVLQLLRL.Q.FNGTFVKLNKASINMLRIVEPYI...GY | |
Retrocopy | RKAGNFHVPMEPKLAFVIRIRGINGVSPKVCKVLQLLRLCQVFNGTFVKLNKASINMLRIVEPYITG<GY |
Parental | PNLKSVNELIYKRGYGKINKKRIALTDNVLIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLS |
PNLKSVNE.IYKRGYGK.NKKRIALTD...I.RSLG.YGII..EDLIH.IY...K.FKEANNF.WPFKLS | |
Retrocopy | PNLKSVNESIYKRGYGKSNKKRIALTD-AFIVRSLGNYGIIRTEDLIHQIYAIEKCFKEANNFFWPFKLS |
Parental | SPRGGMKK-KTTHFVEGGDAGNREDQINRLIRRMN |
SPRGGMKK.KTT.FVEGGDAGNRE..INRLIRRMN | |
Retrocopy | SPRGGMKK<KTTYFVEGGDAGNREN*INRLIRRMN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |