RetrogeneDB ID: | retro_ttru_1783 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_91385:202113..202587(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NIP7 | ||
Ensembl ID: | ENSTTRG00000010012 | ||
Aliases: | None | ||
Description: | NIP7, nucleolar pre-rRNA processing protein [Source:HGNC Symbol;Acc:24328] |
Percent Identity: | 83.54 % |
Parental protein coverage: | 87.78 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | ENLQLLVDRPDGTYCFRLHNDRVYYVSEKILKLAANISGDKLVSLGTCFGKFTKTHKFRLHITALDYLAP |
.NLQLLVD.PD.T.CFRL.ND..YYVSEKILKL.ANI.GDK.VSLGTCFGKFT.THKF.L.ITALDYL.P | |
Retrocopy | QNLQLLVDKPDDTCCFRLQNDWLYYVSEKILKLTANIIGDKQVSLGTCFGKFTQTHKFWLYITALDYLKP |
Parental | YAKYKVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADIPLGFGVAAKSTQDCRKVDPMAI |
YAKYKVWIKPGAEQ.FLY.NHVLKSGLGRI.ENTSQYQG..VYSM.DIPLGFGVAAKSTQD.RKVDP.AI | |
Retrocopy | YAKYKVWIKPGAEQPFLYANHVLKSGLGRIIENTSQYQGDMVYSMTDIPLGFGVAAKSTQDFRKVDPVAI |
Parental | VVFHQADIGEYVRHEETL |
.VFHQA..GEYV.HEETL | |
Retrocopy | AVFHQASTGEYVWHEETL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |