RetrogeneDB ID: | retro_ttru_210 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_156:100624..101362(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL7 | ||
Ensembl ID: | ENSTTRG00000009074 | ||
Aliases: | None | ||
Description: | ribosomal protein L7 [Source:HGNC Symbol;Acc:10363] |
Percent Identity: | 88.35 % |
Parental protein coverage: | 94.98 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | NVREKKKKVPAVPETLKKKR-KNFAELRIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRM |
...EKKKKVPAVPETL.KK...NF.EL.IK.LRKKFAQKMLRKARR.LIYEKAKHYH.EYRQMYRTEIR. | |
Retrocopy | SAEEKKKKVPAVPETL-KKK<VNFTELKIKCLRKKFAQKMLRKARRRLIYEKAKHYHREYRQMYRTEIRT |
Parental | ARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYI- |
A.MARKAGNF.VPAEPKLAFVIRIRGINGVSPKV.KVLQLLRLRQIFNG.FVK...ASINM.RIVEPYI. | |
Retrocopy | AGMARKAGNFHVPAEPKLAFVIRIRGINGVSPKV*KVLQLLRLRQIFNGIFVKHEEASINMMRIVEPYID |
Parental | AWGYP-NLKSVNELIYKRGYGKINKKRIALTDNVLIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLW |
..G.P.NLKSVNELIYKRGYGK.NKKR.AL.DNVLIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLW | |
Retrocopy | CMGVP>NLKSVNELIYKRGYGKSNKKRNALMDNVLIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLW |
Parental | PFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN |
PFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN | |
Retrocopy | PFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |