RetrogeneDB ID: | retro_ttru_364 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_1992:180354..180785(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL26L1 | ||
Ensembl ID: | ENSTTRG00000010624 | ||
Aliases: | None | ||
Description: | ribosomal protein L26-like 1 [Source:HGNC Symbol;Acc:17050] |
Percent Identity: | 80.69 % |
Parental protein coverage: | 99.31 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKV |
MKF.PFVTSD.SKNRKRHFN.PSH.RRKIMSSPLSKEL..KY.V.SMPI.K.DEV.VV.GHYKGQQIGKV | |
Retrocopy | MKFIPFVTSD*SKNRKRHFNVPSHIRRKIMSSPLSKELKRKYCVGSMPI*KYDEVPVV*GHYKGQQIGKV |
Parental | VQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKA-KSRQVGKEKGKYKEEL |
VQVYRKKYV.YIERVQREKANGT.VHVGIHPSKVVITRLKLDKD..KILE.KA..SRQVG.EKG....E. | |
Retrocopy | VQVYRKKYVTYIERVQREKANGTAVHVGIHPSKVVITRLKLDKDHTKILEGKA<RSRQVGEEKGRDEGET |
Parental | IEKMQ |
I.K.. | |
Retrocopy | IGKIR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |