RetrogeneDB ID: | retro_ttru_402 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_2144:227656..228385(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL7 | ||
Ensembl ID: | ENSTTRG00000009074 | ||
Aliases: | None | ||
Description: | ribosomal protein L7 [Source:HGNC Symbol;Acc:10363] |
Percent Identity: | 82.54 % |
Parental protein coverage: | 93.82 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 9 |
Parental | EKKKKVPAVPETLKKKRKNFAELRIKRLRKKFAQKMLRKARR-KLIYEKAKHYHKEYRQMYRTEIRMARM |
EKKKKVPAVPETLKKKRKNFAEL.IKRLRKKFAQKML.KARR.KLIYEKAK.YHKEY.QM.RT.IRMARM | |
Retrocopy | EKKKKVPAVPETLKKKRKNFAELKIKRLRKKFAQKMLQKARR<KLIYEKAKRYHKEYWQM*RTKIRMARM |
Parental | ARK-AGNFYVP-AEPKLA-FVIRIRGINGVS-PKVRKVLQLLRLRQIFNGTFVKLNKASINMLRI-VEP- |
AR......YVP.AEP..A.F.IRIRGI.G.S.PKV.KVLQLL..RQ.F.G.FVKLNKASINM.RI.VEP. | |
Retrocopy | ARN>MNYLYVP>AEPQFA>FFIRIRGIDGMS<PKV*KVLQLLASRQVFKGPFVKLNKASINMQRI>VEP> |
Parental | YIAWGY-PNLKSVNELIYKRGYGKINKKRIAL-TDNVLIARSLGKYGIICMEDLIHEIYTVGKRFKEANN |
YIAW.Y.PNLKSVNELIYKRG.GKINKK..A...DNV.IARSLGKYGIICMEDLIHEIYTVGK...E.NN | |
Retrocopy | YIAWRY>PNLKSVNELIYKRG*GKINKKHTAR<ADNVSIARSLGKYGIICMEDLIHEIYTVGKGL-EKNN |
Parental | FLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN |
FLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINR.IRRMN | |
Retrocopy | FLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRVIRRMN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |