RetrogeneDB ID: | retro_ttru_520 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_2562:222620..223081(-) | ||
Located in intron of: | ENSTTRG00000001218 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CHCHD2 | ||
Ensembl ID: | ENSTTRG00000015185 | ||
Aliases: | None | ||
Description: | coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:HGNC Symbol;Acc:21645] |
Percent Identity: | 65.22 % |
Parental protein coverage: | 87.91 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | PCRPAFKMP-RGSRSRTSRVAPPASRAPQMRTAPRPAPAAQPPAVAPPSAVGSPAAAPRQPGLMAQMATT |
P.R.AFK.P..GSRS.T..VAPPASRAPQMRT...P.PA...PA..PP.A...P.A.........Q.... | |
Retrocopy | PLRRAFKIP<SGSRSCTFGVAPPASRAPQMRTV--PRPA---PAAQPPAAA-PPSAVGSPAAAPRQPGLM |
Parental | AAGVAVGSAVGHTLGHAITGGFSGGSNAEPSRPDITYQEPQGTQLAQQQQNGPCLFEVKQFLECAQNQGD |
A........V.HTLGHA..GGFS.GSNAEPSRPD.T..EPQGTQ.AQQQQNGPC.F.VK.FLECA.NQGD | |
Retrocopy | AQMATTAASVRHTLGHALPGGFSRGSNAEPSRPDVT*REPQGTQPAQQQQNGPCFFQVK*FLECALNQGD |
Parental | LKLCEGFSEVLKQCRLANGLA |
LKLCEGFSEVLKQC.LANGLA | |
Retrocopy | LKLCEGFSEVLKQCKLANGLA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |