RetrogeneDB ID: | retro_ttru_536 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_2618:445923..446245(-) | ||
Located in intron of: | ENSTTRG00000004168 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL12 | ||
Ensembl ID: | ENSTTRG00000015700 | ||
Aliases: | None | ||
Description: | ribosomal protein L12 [Source:HGNC Symbol;Acc:10302] |
Percent Identity: | 67.27 % |
Parental protein coverage: | 65.45 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | LRITVKLTIQNRQAQIEVVPSAS-ALIIKALK-EPPRDRKKQKNIKHSGNITFDEIVSIARQMRHRSLAR |
.RITVK.TI.NRQAQIEVVPSAS..L.IK.LK.E.PR..KKQKN.KH.GN.TFDEI..IA.Q..H..LAR | |
Retrocopy | VRITVKMTILNRQAQIEVVPSAS<SLNIKTLK<ELPRNGKKQKNYKHNGNSTFDEIANIA*QIQHQPLAR |
Parental | ELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP |
ELSG.IKEIL..A..VG.N.DG.HP.DI..DI.SG..E.P | |
Retrocopy | ELSGIIKEILEAA*FVGYNADGCHPYDITNDIGSGTAEHP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |