RetrogeneDB ID: | retro_ttru_566 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_2697:1042616..1043069(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS14 | ||
Ensembl ID: | ENSTTRG00000013035 | ||
Aliases: | None | ||
Description: | ribosomal protein S14 [Source:HGNC Symbol;Acc:10387] |
Percent Identity: | 100. % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESS |
MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESS | |
Retrocopy | MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESS |
Parental | PYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST |
PYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST | |
Retrocopy | PYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST |
Parental | RRKGGRRGRRL |
RRKGGRRGRRL | |
Retrocopy | RRKGGRRGRRL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000004644 | 2 retrocopies | |
Bos taurus | ENSBTAG00000008570 | 2 retrocopies | |
Canis familiaris | ENSCAFG00000018094 | 2 retrocopies | |
Callithrix jacchus | ENSCJAG00000020981 | 1 retrocopy | |
Cavia porcellus | ENSCPOG00000024408 | 2 retrocopies | |
Erinaceus europaeus | ENSEEUG00000010462 | 3 retrocopies | |
Latimeria chalumnae | ENSLACG00000016164 | 1 retrocopy | |
Loxodonta africana | ENSLAFG00000031195 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000013279 | 4 retrocopies | |
Macaca mulatta | ENSMMUG00000002848 | 5 retrocopies | |
Mustela putorius furo | ENSMPUG00000013776 | 1 retrocopy | |
Mus musculus | ENSMUSG00000024608 | 5 retrocopies | |
Nomascus leucogenys | ENSNLEG00000010366 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000011509 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000000721 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000018774 | 10 retrocopies | |
Tursiops truncatus | ENSTTRG00000013035 | 1 retrocopy |
retro_ttru_566 ,
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