RetrogeneDB ID: | retro_ttru_572 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_2710:141100..141499(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TAF9B | ||
Ensembl ID: | ENSTTRG00000015964 | ||
Aliases: | None | ||
Description: | TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa [Source:HGNC Symbol;Acc:17306] |
Percent Identity: | 70.8 % |
Parental protein coverage: | 68.02 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | ESGKMAPSKNAPRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTSILDDAKIYSSHAKKPNVDADDV |
.SGKM...K..P.DA..M.QILKDM.IT..EPRVINQ.LEFAF..VT.ILDD.KIYSSHAKK..VDADDV | |
Retrocopy | DSGKMPSPKSMPKDAQMMTQILKDMEITDHEPRVINQTLEFAFQFVTTILDDVKIYSSHAKKATVDADDV |
Parental | RLAIQCRADQSFTSPP-PRDFLLDIA-RQKNQTPLPLIKPYAGPRLPPDRYCLT-APNYRLKSLIKK |
RLA.QC...QSFTSPP.PRDFLLD...RQ.NQT.LPL.KPY..P.LP.DRYCLT..PNY.LKSL.K. | |
Retrocopy | RLAMQCCTNQSFTSPP<PRDFLLDVE<RQRNQTLLPLVKPYSAPKLPLDRYCLT<SPNYKLKSLPKR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |