RetrogeneDB ID: | retro_ttru_577 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_273:581105..581413(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | POMP | ||
Ensembl ID: | ENSTTRG00000012924 | ||
Aliases: | None | ||
Description: | proteasome maturation protein [Source:HGNC Symbol;Acc:20330] |
Percent Identity: | 78.18 % |
Parental protein coverage: | 75.89 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | FSYVKNELLPSHPLELSEK-NFQLNQDKMNFSTLRN-IQGLFAPLKLQMEFKAVQQVQRLPFLPSSNLSL |
FS.VKNE..PSHPL.LSE..NFQLNQDKMNFSTLRN...GLFAPL.LQME.KA.Q....LPFLPSSNLSL | |
Retrocopy | FSCVKNERFPSHPLKLSEI>NFQLNQDKMNFSTLRN<LWGLFAPLNLQMECKAMQ---HLPFLPSSNLSL |
Parental | DI-LRGNDETIGFEDILNDPSQSELMGEPHLMVEYKLGLL |
DI.LR.NDE.IGFEDI.ND.SQSELMGEPHL.VEYKL..L | |
Retrocopy | DI<LRNNDEPIGFEDIFNDTSQSELMGEPHL-VEYKLNFL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |