RetrogeneDB ID: | retro_ttru_619 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_2915:750896..751183(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | COX6B1 | ||
Ensembl ID: | ENSTTRG00000002241 | ||
Aliases: | None | ||
Description: | cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous) [Source:HGNC Symbol;Acc:2280] |
Percent Identity: | 71.13 % |
Parental protein coverage: | 94.12 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | AGGDRFRVSTMAEDIKTKIKNYQTAPFDSRFPNQNQTR-NCWQNYLDFHRCEKAMTAKGGDVSVCEWYRR |
A.G....VS..AEDI..KIKNYQ.APFDS.FPNQ.QTR..CW.NYL.FH.CEKAM.AKGGDV..CE.Y.. | |
Retrocopy | ASGVSLGVSSVAEDINSKIKNYQPAPFDSHFPNQSQTR<DCWRNYLGFHHCEKAMSAKGGDVPMCE*YWC |
Parental | VYKSLCPISWVSAWDDRRAEGTFPGKI |
VYKSLCPI.WVS.WDDR.AE..FPGKI | |
Retrocopy | VYKSLCPIAWVSTWDDRWAESMFPGKI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |