RetrogeneDB ID: | retro_ttru_672 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_3045:31121..31574(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EBAG9 | ||
Ensembl ID: | ENSTTRG00000001745 | ||
Aliases: | None | ||
Description: | estrogen receptor binding site associated, antigen, 9 [Source:HGNC Symbol;Acc:3123] |
Percent Identity: | 90.07 % |
Parental protein coverage: | 62.14 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | RLICRSGRGRKLSGDQITLPTTVDYSSVPKQTDVEEWTSWDEDAPTSVKIEGGNGNVATQQNALEQLEPD |
RLI.R.GRGRKLSGDQ..LPTTVD.SSVPKQTDVEEW.SW.EDAPTSVKIEGGNGNVATQQNALE.LEPD | |
Retrocopy | RLIRRPGRGRKLSGDQRILPTTVDSSSVPKQTDVEEWASWNEDAPTSVKIEGGNGNVATQQNALE*LEPD |
Parental | YFKDMTPTIRKTQKIIIKKREPLNFGIPDGSTGFSSRLAATQDMPFIHQSPELGDLDTWQENTNAWEEEE |
YFKDMTP.IRKTQKIIIKKREPLNFGIPDGSTGFSSRLA.TQD..FIHQSPELGDL.TWQENTNAWEEEE | |
Retrocopy | YFKDMTPAIRKTQKIIIKKREPLNFGIPDGSTGFSSRLAVTQDTSFIHQSPELGDLGTWQENTNAWEEEE |
Parental | DAAWQAEEVLR |
DAAWQ..EVLR | |
Retrocopy | DAAWQDKEVLR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000006190 | 1 retrocopy | |
Choloepus hoffmanni | ENSCHOG00000007848 | 5 retrocopies | |
Cavia porcellus | ENSCPOG00000001059 | 1 retrocopy | |
Dipodomys ordii | ENSDORG00000010177 | 2 retrocopies | |
Equus caballus | ENSECAG00000009719 | 2 retrocopies | |
Felis catus | ENSFCAG00000025490 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000014115 | 3 retrocopies | |
Monodelphis domestica | ENSMODG00000004795 | 2 retrocopies | |
Mus musculus | ENSMUSG00000022339 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000004220 | 2 retrocopies | |
Sus scrofa | ENSSSCG00000006024 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000015326 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000001745 | 2 retrocopies |
retro_ttru_496, retro_ttru_672 ,
|