RetrogeneDB ID: | retro_ttru_682 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_3069:434285..434974(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CACYBP | ||
Ensembl ID: | ENSTTRG00000010399 | ||
Aliases: | None | ||
Description: | calcyclin binding protein [Source:HGNC Symbol;Acc:30423] |
Percent Identity: | 90.48 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MASTVEELQKDLEEVKVLLEKATRKRVRDA-TAEKSRIETEIKNKMQQKSQRKAELLENEKPAAVVAPIT |
MAS.VEELQKDLEEVKVLLEKATRKRVRDA.TAEKS.IETEIK.K.QQKSQRKAELLE.EKPA.VVA.IT | |
Retrocopy | MASAVEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKTKRQQKSQRKAELLESEKPATVVASIT |
Parental | TGY-TVKISNYGWDQSDKFVKIYISLTGVHQVPAENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPIS |
T...TVKISNYGWDQSDKFVKIY..LTGVHQVPAENVQVHFTERSFDLLVKNLNGKSYSMI.NNLL.PIS | |
Retrocopy | TER<TVKISNYGWDQSDKFVKIYMTLTGVHQVPAENVQVHFTERSFDLLVKNLNGKSYSMITNNLL*PIS |
Parental | VEGSSKKIKTDTVLILCRKKAENTRWDYLTQVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMK |
VEGS.KKIKTDTVLILCRKKAENT...YLTQVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDG.DD.K | |
Retrocopy | VEGSQKKIKTDTVLILCRKKAENTP*VYLTQVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGGDDVK |
Parental | RTINKAWVESREKQAKGDTEF |
RTINK.WVESREKQAKGDTEF | |
Retrocopy | RTINKVWVESREKQAKGDTEF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |