RetrogeneDB ID: | retro_ttru_71 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_1118:382172..382779(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARL6IP1 | ||
Ensembl ID: | ENSTTRG00000005171 | ||
Aliases: | None | ||
Description: | ADP-ribosylation factor-like 6 interacting protein 1 [Source:HGNC Symbol;Acc:697] |
Percent Identity: | 90.2 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MAEGDNRSTNVLAAETANLEEQLQGWGEVMLMADKVLRWERAWFPPAIMGVVSLVFLTIYYLDPSVLSGV |
M.EGDNRSTN..AA.TA.LEEQLQGW.E.MLMADKVLRWE.AWFPPAIMGVVSL.FLTIYYLDPSVLSGV | |
Retrocopy | MEEGDNRSTNLPAAGTASLEEQLQGWREAMLMADKVLRWEKAWFPPAIMGVVSLEFLTIYYLDPSVLSGV |
Parental | SCFVMFLCLADYLVPILAPRIFGSNKWTTEQQQRFHEICSNLVKT-RRRAVGWWKRLFTLKEEKPKMYFM |
SCFVMFLCLADYLVPILAPRIFGSNKWTTEQQQRFHEICSNLVKT..R....W.KRLFTLKEEKPKMYFM | |
Retrocopy | SCFVMFLCLADYLVPILAPRIFGSNKWTTEQQQRFHEICSNLVKT>HRAVGCW-KRLFTLKEEKPKMYFM |
Parental | TMIISLAAVAWVGQQVHNLLLTYLIVTFLLLLPGLNQHGIISKYIGMAKREINKLLKQKEKKNE |
TMIISLA.VAWVGQQVHNLLLT.LIVTFLLLLPGLNQHGII.KY.GMAKREINKLLKQKEKKNE | |
Retrocopy | TMIISLAVVAWVGQQVHNLLLTHLIVTFLLLLPGLNQHGIILKYSGMAKREINKLLKQKEKKNE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |