RetrogeneDB ID: | retro_ttru_732 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_3191:129282..129613(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | HPRT1 | ||
Ensembl ID: | ENSTTRG00000009954 | ||
Aliases: | None | ||
Description: | hypoxanthine phosphoribosyltransferase 1 [Source:HGNC Symbol;Acc:5157] |
Percent Identity: | 90.09 % |
Parental protein coverage: | 52.63 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | ISDDEPGYDLDLFCIPNHYAEDLEKVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLK-GGYKFFADL |
.SD.E.GYDLDLFCIPNHYAEDLEKVFIP.GLIMDRTE.LARDVM.EMGGHHIVAL.VL..GGYKFFADL | |
Retrocopy | MSDNEAGYDLDLFCIPNHYAEDLEKVFIPRGLIMDRTEQLARDVMEEMGGHHIVALRVLN>GGYKFFADL |
Parental | LDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGG |
LDYIKALNRNSDRSIPM.VDFIR.KSYCNDQSTGDIKVIGG | |
Retrocopy | LDYIKALNRNSDRSIPMMVDFIRRKSYCNDQSTGDIKVIGG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |