RetrogeneDB ID: | retro_ttru_783 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_3403:15151..15833(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DNAJA1 | ||
Ensembl ID: | ENSTTRG00000007387 | ||
Aliases: | None | ||
Description: | DnaJ (Hsp40) homolog, subfamily A, member 1 [Source:HGNC Symbol;Acc:5229] |
Percent Identity: | 97.37 % |
Parental protein coverage: | 57.18 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | QQIQSVCMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDG-QKITFHGEGDQEPGLEPGDI |
QQIQSVCMECQGHGERISPKDRCKSCNGRKIV.EKKILEVHIDKGMKDG.QKIT.HGEGDQEPGLEPGDI | |
Retrocopy | QQIQSVCMECQGHGERISPKDRCKSCNGRKIVQEKKILEVHIDKGMKDG>QKITSHGEGDQEPGLEPGDI |
Parental | IIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMP |
II.LDQK.HAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMP | |
Retrocopy | IIILDQKNHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMP |
Parental | IYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVEETDEMDQVELVDFDPNQERRRHYNGE |
IY.RPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVEETDEMDQVELVDFDPNQERRRHYNGE | |
Retrocopy | IYHRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVEETDEMDQVELVDFDPNQERRRHYNGE |
Parental | AYEDDEHHPRGGVQCQTS |
AYEDDEHHPRGGVQCQTS | |
Retrocopy | AYEDDEHHPRGGVQCQTS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |