RetrogeneDB ID: | retro_ttru_913 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_609:845381..846113(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SRD5A3 | ||
Ensembl ID: | ENSTTRG00000000958 | ||
Aliases: | None | ||
Description: | steroid 5 alpha-reductase 3 [Source:HGNC Symbol;Acc:25812] |
Percent Identity: | 97.13 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | YFSHFYIISVLWNGFLLWSLTQSLFVGAPFPNWLHHLLRILGAAQFRGGELVLSAFLVLVFLWLHSLRRL |
YFSHFYIISVLWNGFLLWSLTQSLFVGAPFPNWLHHLLRILGAAQFRGGEL.LSAFLVLVFLWLHSLRRL | |
Retrocopy | YFSHFYIISVLWNGFLLWSLTQSLFVGAPFPNWLHHLLRILGAAQFRGGELALSAFLVLVFLWLHSLRRL |
Parental | FECFYVSVFSNAMIHVVQYCFGLVYYVLVGLTVLSQVPMDGRNVYVIGKNLLMQARWFHILGMMMFIWSS |
FECFYVSVF..AMIHVVQYCFGLVYYVLVGLTVLSQVPMDGRNVYVIGKNLLM.AR.FHILGMMMFIWSS | |
Retrocopy | FECFYVSVFFKAMIHVVQYCFGLVYYVLVGLTVLSQVPMDGRNVYVIGKNLLM*ARRFHILGMMMFIWSS |
Parental | VHQYKCHVILGNLRKNKAGVVIHCNHRIPFGDWFEYVSSPNYLAELMIYISMAVTFGFHNLTWWLVVTYV |
VHQYKCHVILGNLRKNKAGVVIHCNHRIPFGDWFEYVSSPNYLAELMIYISMAV.FGFHNLTWWLVVTYV | |
Retrocopy | VHQYKCHVILGNLRKNKAGVVIHCNHRIPFGDWFEYVSSPNYLAELMIYISMAVAFGFHNLTWWLVVTYV |
Parental | FFSQALSAFLSHKFYKSKFVSYPKHRKAFLPFLF |
FF.QALSAFLSHKFYKSKFVSYPKHRKAFLPFLF | |
Retrocopy | FFNQALSAFLSHKFYKSKFVSYPKHRKAFLPFLF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000004093 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000000317 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000016070 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000000958 | 1 retrocopy |
retro_ttru_913 ,
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