« Back to Solanum tuberosum search


Detailed information on CNT0010227


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0006210, E-value = 3e-06 (V. vinifera)
CNT0001856, E-value = 1e-08 (G. max)

Expression of CNT0010227

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MELPGIFRGPEKFIQGPATWSYLCNSISESSSHTPQYTLYCCKVCIWMMILG*

>peptide 2 (77 aa)
MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFQEYSGVRRNSFKGQLLGLIYATQYLRVLLILLNTLCIVVKFVSG*

>peptide 3 (32 aa)
MDEEASLRKSRKSSHILFETLIQTDLLLLVLD*

>peptide 4 (55 aa)
MKGSLVVRILMMMSKAPVFDFNLSLLEKPEPCYVVSYVDCQLLSLLKMCQCRTCVP

Sequence

>CNT0010227
AAAAAAATGTATGAGGTAAATTGTGACTAACGGAGACGGTAAATATGAAACTTAGCCCTTTGCCTCTTTAGTGAAAGTATACGTATTGTTCAGATTGCAG
ATCTGGGTTCCAAATCAAGTCTATTCATATTTCACTGAGAGTTTCCGCCTGCTGCCGCCGGTTGACGCCTGCCACCAGCCGCCGATCGTTCGTCTTCCTC
GTCGTCAGGGCATGGGTTTGTGGACATTGCTCGAGGGGTGCCTGCTTCTTGCAAATGCACTTGCAATATTGAACGAAGACCGTTTCCTTGCTCCGAGAGG
ATGGAGCTTCCAGGAATATTCAGGGGTCCGGAGAAATTCATTCAAGGGCCAGCTACTTGGTCTTATTTATGCAACTCAATATCTGAGAGTTCTTCTCATA
CTCCTCAATACACTCTGTATTGTTGTAAAGTTTGTATCTGGATGATGATTCTTGGGTGAGACACGAAAGTTCATAGATGGATGGATGAAGAAGCTTCCTT
GAGGAAAAGCCGCAAGTCTAGTCACATTTTGTTCGAAACCCTGATACAAACTGATCTTCTTCTATTAGTTCTAGATTAAGAATTGTTTTTCAGTCTTCGT
GAACAACTGTTGTAAAATAGGTCATCAGTTCAACTACCTATGCATAGTAGTTTCTGCAGTTTTTTGAATACATGTGGAATACTGTCCATCTCTTCTTAGC
ATTTGCTTATCAGGATGTTGTTTTAATGTGAAACCAATTCTTGTGATGAAAGGGAGTCTTGTAGTTAGGATTCTAATGATGATGAGTAAAGCCCCTGTCT
TTGACTTTAACCTTTCATTGTTAGAAAAACCTGAACCTTGTTATGTAGTTTCATATGTCGACTGCCAGCTTCTAAGCTTGTTAAAGATGTGCCAGTGTAG
AACTTGTGTACCC