| File | Description |
|---|---|
| amborella.fasta | lncRNAs in FASTA format (Amborella trichopoda) |
| arabidopsis.fasta | lncRNAs in FASTA format (Arabidopsis thaliana) |
| chlamydomonas.fasta | lncRNAs in FASTA format (Chlamydomonas reinhardtii) |
| glycine.fasta | lncRNAs in FASTA format (Glycine max) |
| oryza.fasta | lncRNAs in FASTA format (Oryza sativa) |
| physcomitrella.fasta | lncRNAs in FASTA format (Physcomitrella patens) |
| potato.fasta | lncRNAs in FASTA format (Solanum tuberosum) |
| selaginella.fasta | lncRNAs in FASTA format (Selaginella moellendorffii) |
| vitis.fasta | lncRNAs in FASTA format (Vitis vinifera) |
| zea.fasta | lncRNAs in FASTA format (Zea mays) |
| File | Description |
|---|---|
| lncRNAs_vs_NONCODE_Arabidopsis_thaliana.txt | Best BLAST hits against A. thaliana lncRNAs from NONCODE. |
| lncRNAs_vs_PNRD_Oryza_sativa.txt | Best BLAST hits against O. sativa lncRNAs from PNRD (Plant Non-coding RNA Database). |
| lncRNAs_vs_PNRD_Zea_mays.txt | Best BLAST hits against Z. mays lncRNAs from PNRD (Plant Non-coding RNA Database). |
| lncRNAs_vs_SwissProt.txt | Best BLAST hits against Swiss-Prot proteins. |
| File | Description |
|---|---|
| general_information.txt | A tab-delimited file with the followwing fields: CANTATA id, species, CPC status, CPC score, max. peptide length, max_expression (RPKM). |
| potential_functions.txt | A tab-delimited file with the following fields: CANTATA id, predicted functions (either splicing regulation or masking miRNA binding sites). |
| coordinates.txt | A tab-delimited file with the following fields: CANTATA id, species, chromosome, start, end, strand. |