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Detailed information on CNT0001132


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9M9L0|APC11_ARATH, E-value = 2e-57

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0007009, E-value = 9e-68 (V. vinifera)
CNT0042380, E-value = 3e-46 (A. thaliana)
CNT0034732, E-value = 3e-21 (P. patens)
CNT0022405, E-value = 9e-31 (A. trichopoda)
CNT0016572, E-value = 1e-39 (S. tuberosum)

Expression of CNT0001132

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MAFDGCCPDCKLPGDDCPLIWGVCNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG*

>peptide 2 (100 aa)
FLHFKSWSPLRIRTNPNFFLLLLGTKMKVNILRILPSHSSSFHLLPLSLFYYFAFYMFLSLLPFFVFFFFAFKFSCFYFQPNSHISRIGYLWKRKRICFS
*

>peptide 3 (31 aa)
MFFLTKVSTWISAVLRKRMACCCFMDLGCPG*

>peptide 4 (37 aa)
MLLLHGLGMPRMKPVGFVGWPLMDVVLTANFLEMTAH*

Sequence

>CNT0001132
CCTTTCTCCATTTCAAATCTTGGTCTCCACTACGCATTCGGACAAACCCTAACTTCTTTTTGCTGTTGTTGGGCACCAAGATGAAAGTGAACATCTTGCG
TATCCTTCCTTCCCATTCTTCTTCGTTTCATCTCTTACCCCTTTCATTGTTTTACTATTTTGCATTTTACATGTTTTTGTCTTTGCTTCCCTTTTTTGTA
TTTTTTTTTTTTGCTTTCAAATTTTCGTGCTTTTACTTTCAGCCTAATTCTCATATATCGAGAATTGGGTATTTGTGGAAAAGGAAAAGAATATGTTTTT
CTTGACAAAGGTCTCTACTTGGATATCTGCTGTACTTCGAAAAAGAATGGCATGCTGTTGCTTCATGGACTTGGGATGCCCAGGATGAAACCTGTGGGAT
TTGTAGGATGGCCTTTGATGGATGTTGTCCTGACTGCAAACTTCCTGGAGATGACTGCCCACTGATTTGGGGTGTATGCAATCACGCATTTCATCTGCAC
TGTATCCTGAAATGGGTGAATTCTCAGACATCACAAGCGCATTGCCCCATGTGCCGTAGGGAGTGGCAGTTTAAAGGATGAGAGCTCAGGTTTTCATTTT
CTTTTTCGAGTGTGACCAGAGAGCAATGTAAATTGGTATGGTTAATTCGAAGATGTATTGTTTCCTTCATGTTAAATCTGTATCTTCATTGTAACTTGTA
AGGAGATCGAAATCAAAGTTTCTGTTAAGTGCAAGTTTATTTTTTCCATTAATGACTAATGATAATGTCCTTTTCCTTTGTTTTCTAATATGATTCGATA
GTGTATGCTGATGTCAAGATGGTCGTATGTATAGATAACAACTGGATTCCACAAGAGTAAATAGTCAAGCTGGTCATATATATGATTGAAATTGAACCTT
TATAAATTTTACTTGGTTAAGGTTTCAT